48 Reserved Words
The reserved words below are listed alphanumerically. The right column shows titles of related Detailed Descriptions and Examples where each reserved word is used.
| Reserved word | Related topics |
|---|---|
; |
Abbreviated code |
# |
$DATA |
* |
$DATA |
@ |
$DATA |
: |
II data item TIME data item |
@ |
Verbatim code |
-2LL |
$ESTIMATION, $ESTM $ESTIMATION record options |
-2LOGLIKELIHOOD, -2LLIKELIHOOD |
$ESTIMATION, $ESTM |
A_0 |
Initial Steady State: I_SS, ISSMOD |
A_0FLG |
$PK |
A_0FLG, A_0, A_INITIAL |
Compartment Initialization: A_0 Compartment Initialization: A_0FLG Compartment Initialization Block |
A_0(n) |
Initial Steady State: I_SS, ISSMOD $PK PK |
$ABBREVIATED |
$ABBREVIATED Abbreviated Function Examples BIVARIATE FUNCTION Infn_interpolation example 2 |
ABORT |
Abbreviated code $ESTIMATION, $ESTM Interoccasion_variability example $THETA |
ABS |
Abbreviated code |
ABS0, ABSZERO |
$SCATTERPLOT |
ACCEPT |
$DATA Ignore_accept example |
ACOS |
Abbreviated code |
ADDITIONAL |
Calling protocol phrase |
ADDL |
Absorption lag parameter ADDL data item $BIND Bind example Dose event record Empirical SS dose event record $INPUT SS dose event record TDM example |
ADV10 |
SS6 SS9 |
ADV13 |
SS6 SS9 |
ADV13-ADV18 |
DES Diff Eq Solver Settings |
ADV14 |
SS6 SS9 |
ADV16 |
SS6 SS9 |
ADV18 |
SS6 SS9 |
ADV6 |
DES |
ADV6 |
Diff Eq Solver Settings SS6 SS9 |
ADV6, ADV8 |
$DES |
ADV6, ADV8, ADV13-14, ADV16, ADV18 |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 PK_PD_simultaneous_2 example PK_PD_simultaneous_4 example |
ADV8 |
DES Diff Eq Solver Settings SS6 SS9 |
ADV9 |
DES Diff Eq Solver Settings |
ADV9, ADV13-ADV18 |
$DES |
ADVAN1 |
ADVAN1 ADVAN (general) Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 7r Phenobarb example |
ADVAN10 |
ADVAN10 ADVAN (general) Michaelis_Menten example |
ADVAN11 |
ADVAN11 ADVAN (general) |
ADVAN12 |
ADVAN12 ADVAN (general) |
ADVAN13 |
ADVAN (general) Bayes Example 6 Bayes Example 6s Bayes Example 6sb MXSTEP |
ADVAN14 |
ADVAN (general) MXSTEP |
ADVAN15 |
ADVAN9_15 ADVAN (general) $AES AES $AESINITIAL CALL data item MXSTEP |
ADVAN16 |
ADVAN (general) MXSTEP |
ADVAN17 |
ADVAN9_15 ADVAN (general) $AES AES $AESINITIAL CALL data item MXSTEP |
ADVAN18 |
ADVAN (general) MXSTEP |
ADVAN2 |
ADVAN2 ADVAN (general) Bayes Example 10 Bayes Example 10l Control3 example Control5 example Interoccasion_variability example |
ADVAN3 |
ADVAN3 ADVAN (general) Bayes Example 1 Bayes Example 1B Bayes Example 2 Bayes Example 8 Bayes Example 9 FOCE_PARALLEL example Multiple_dose example |
ADVAN4 |
ADVAN4 ADVAN (general) |
ADVAN5 |
ADVAN5 ADVAN7 ADVAN (general) PK_PD_simultaneous_3 example Three_compartment example |
ADVAN6 |
ADVAN (general) |
ADVAN6, ADVAN8 |
Control7 example INTERPOLATION IN $DES Michaelis_Menten example |
ADVAN7 |
ADVAN5 ADVAN7 ADVAN7: FACTOR ADVAN (general) Control6 example PK_PD_simultaneous_3 example Three_compartment example |
ADVAN8 |
ADVAN (general) |
ADVAN9 |
ADVAN9_15 ADVAN (general) $AES AES $AESINITIAL CALL data item MXSTEP |
ADVAN, ADVAN1-ADVAN18 |
ADVAN (general) $SUBROUTINES |
AES |
ADVAN9_15 $AES AES CALL data item CALLFL Calling protocol phrase DES AES: ICALL, IDEFD, IDEFA $SUBROUTINES |
$AES |
$AES |
AES |
AES |
AESINITIAL, AES0 |
ADVAN9_15 |
$AESINITIAL, $AES0 |
$AESINITIAL |
AESINITIAL, AES0 |
$AESINITIAL |
AGH |
NONMEM output files |
ALAG |
Moving Area Under the Curve Example |
ALAG1 |
Absorption lag parameter Bind example PK_PD_sequential_1 example PK_PD_sequential_2 example |
ALAG1-ALAG9 |
$BIND Dose event record $PK |
ALAGN |
Dose event record $PK PK |
ALPHA |
Exogenous supplementation example $PK TRANS5 TRANS6 |
AMT |
AMT data item Control5 example Dose event record Exogenous supplementation example $INPUT SS dose event record |
A(n) |
$AES AES $AESINITIAL $DES DES $ERROR ERROR Initial Steady State example $PK PK_PD_simultaneous_4 example State Vector: A State Vector Time: TSTATE |
AND |
$MODEL |
$ANNEAL |
$ANNEAL CONSTRAINT |
Annnnn |
$TABLE |
ANRD |
$TOL TOL |
ANRDC |
$TOL TOL |
AOB |
Exogenous supplementation example $PK TRANS5 |
APPEND |
$TABLE |
ASIN |
Abbreviated code |
ATAN |
Abbreviated code |
ATOL |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options $SUBROUTINES $TOL TOL |
ATOLC |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 |
A_UFLG, A_U |
Compartment Update Block (NM75) |
AUTO |
$ESTIMATION, $ESTM $ESTIMATION record options |
AXIS |
FINEDATA NMTEMPLATE |
BACKGROUND, BACKGROUND |
nmfe utility program |
BAYES |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
BAYES, BAYESIAN |
Aneal $ESTIMATION, $ESTM |
BAYES_PHI_STORE |
$ESTIMATION, $ESTM $ESTIMATION record options |
BETA |
Exogenous supplementation example $PK TRANS5 TRANS6 |
BFM |
NONMEM output files |
BIND |
$BIND Dose Time Non-Event: DOSTIM $PK |
$BIND |
$BIND |
BIND |
Bind example |
BIONLY |
$ESTIMATION, $ESTM $ESTIMATION record options |
BLANKOK |
$DATA |
BLOCK |
Control4 example Interoccasion_variability example Mixture_model example $OMEGA $OMEGAP, $OMEGAPD $SIGMA |
BOOTDATA |
$ESTIMATION, $ESTM |
BOOTSTRAP |
$NONPARAMETRIC $SIMULATION |
BY |
$MODEL Phenobarb example $SCATTERPLOT $TABLE |
C |
Correlation Across L2 Records Simulation: SIMEPS Error Code |
CALL |
CALL data item CALLFL Calling protocol phrase $ERROR Expectation block Initialization-Finalization block $INPUT $PK Simulation block |
CALLFL |
$AESINITIAL $BIND Bind example CALL data item CALLFL Calling protocol phrase Control3 example Control5 example Control6 example Control7 example $ERROR $PK TDM example |
CALPHA |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 7r Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
CCONTR |
CCONTR CCONTR example $CONTR MIX CONTR: THETA Stubs $SUBROUTINES |
CDATA |
CCONTR: Y, DATA, N1, N2, DIM |
CDF_L, CDF_LA |
NPD, NPDE, NPDE_MODE, DV_LOQ, CD |
CELS |
CELS |
CENTERING |
$ESTIMATION record options |
CENTERING, NOCENTERING |
$ESTIMATION, $ESTM |
CHAIN |
$CHAIN $ESTIMATION, $ESTM |
$CHAIN |
$CHAIN |
CHECKMU |
$ABBREVIATED |
CHECKOUT, CHECKDATA |
$DATA |
CHOL |
CHOL |
CHOLESKY |
$OMEGA $SIGMA |
CHOLROFF |
$COVARIANCE, $COVR |
CINTERVAL |
Bayes Example 8 $ESTIMATION, $ESTM $ESTIMATION record options |
CIPRED |
$TABLE |
CIRES |
$TABLE |
CITER |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 7r Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
CIWRES |
$SCATTERPLOT $TABLE |
CIWRESI |
$TABLE |
CL |
$PK TRANS2 TRANS3 TRANS4 |
CLOCKSEED |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options $TABLE |
CLOSE |
Write print |
CLT |
$ESTIMATION, $ESTM NONMEM output files |
CM38 |
CONTR SPTWO |
CMT |
CMT PCMT data item Default compartment $INPUT |
Cnnnnn |
$TABLE |
CNSAMP |
$ESTIMATION, $ESTM $ESTIMATION record options |
CNT |
CONTR NWPRI NWPRI examples $PRIOR PRIOR SPTWO TNPRI TNPRI examples |
CNTID |
Objective Function Value Individual Objective Function Value Individual exampl Write print |
CNV |
$ESTIMATION, $ESTM NONMEM output files |
COI |
$ESTIMATION, $ESTM NONMEM output files |
COMACT |
$ABBREVIATED COMACT, COMSAV COM COMACT COMSAV COMRES Copying block DES AES: ISFINL Displayed PRED-Defined Items |
COM(n) |
Abbreviated code COM COMACT COMSAV COMRES Copying block PRED-Defined Variables $TABLE |
COMPACT |
$ABBREVIATED DES DES AES: ICALL, IDEFD, IDEFA |
COMPARTMENT, COMP |
$MODEL |
COMPRESS |
$COVARIANCE, $COVR |
COMRES |
$ABBREVIATED Abbreviated code COM COMACT COMSAV COMRES Copying block PRED-Defined Variables |
COMSAV |
$ABBREVIATED COMACT, COMSAV COM COMACT COMSAV COMRES Copying block Displayed PRED-Defined Items |
CONDITIONAL |
$ESTIMATION, $ESTM $ESTIMATION record options $NONPARAMETRIC $SCATTERPLOT $TABLE |
CONDITIONAL, UNCONDITIONAL |
$COVARIANCE, $COVR |
CONSTRAIN |
$ESTIMATION record options |
CONSTRAIN, CONSTRAINT |
$ESTIMATION, $ESTM |
CONSTRAINT |
CONSTRAINT Aneal $ANNEAL |
CONT |
CONT data item $INPUT |
CONTR |
CCONTR example CCONTR: Y, DATA, N1, N2, DIM $CONTR CONTR CONTR: KCALL CONTR: Y DATA NOBS MIX CONTR: THETA Stubs $SUBROUTINES |
$CONTR |
$CONTR |
CONTR |
CONTR |
COR |
$ESTIMATION, $ESTM NONMEM output files |
CORRELATION |
$OMEGA $SIGMA |
CORRL2 |
Correlation Across L2 Records NONMEM modules Simulation: SIMEPS Error Code variables in modules |
COS |
Abbreviated code |
COV |
$ESTIMATION, $ESTM NONMEM output files |
COVARIANCE |
$OMEGA $SIGMA |
$COVARIANCE |
Control3 example |
COVARIANCE, COVR |
$COVARIANCE, $COVR Phenobarb example |
$COVARIANCE, $COVR |
$COVARIANCE, $COVR Phenobarb example |
COVARIANCE, COVR |
Phenobarb example |
CPRED |
$SCATTERPLOT $TABLE |
CPREDI |
$SCATTERPLOT $TABLE |
CPU |
NONMEM output files |
CRES |
$SCATTERPLOT $TABLE |
CRESI |
$SCATTERPLOT $TABLE |
CRIT |
CRIT Stubs $SUBROUTINES |
CSV |
$DATA |
CTYPE |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $CHAIN $ESTIMATION, $ESTM $ESTIMATION record options |
CWRES |
$SCATTERPLOT $TABLE |
CWRESI |
$SCATTERPLOT $TABLE |
D1 |
Multiple_dose example |
D1-D9 |
Dose event record Duration parameter $PK |
DA |
AES DES |
DA_0, D2A_0 |
Compartment Initialization: A_0 |
DADT(n) |
Control7 example $DES DES |
DAETA, D2AETA |
State Vector: A |
DATA |
CCONTR: Y, DATA, N1, N2, DIM $CONTR CONTR: Y DATA NOBS $DATA |
$DATA |
FINISH |
DATA |
FINISH $MIX MIX: DATA RECORDS=ID Example RECORDS=ID Example 2 |
$DATA |
Control3 example $DATA RECORDS=ID Example RECORDS=ID Example 2 |
DATAMAXIMUM, DMAX |
$WARNINGS |
DATE, DAT1, DAT2, DAT3 |
DATE data item $INPUT |
DATREC |
Finalization example ($PRED and $INFN) INFN Infn_interpolation example 1 Infn_interpolation example 2 PRED |
DDE |
DDEXPAND |
DDEXPAND |
DDEXPAND |
DDOST, D2DOST |
Dose Time Non-Event: DOSTIM |
DEFAULT |
$DEFAULT |
$DEFAULT |
$DEFAULT |
DEFDOSE, DEFOBS, DEFOBSERVATION |
$MODEL Three_compartment example |
DELIM |
$ESTIMATION, $ESTM $ESTIMATION record options FINEDATA FORMAT NMTEMPLATE |
DEN_, CDEN_ |
Nonparametric Density: DEN_, CDEN_ Nonparametric example |
DERCONT |
$ESTIMATION, $ESTM $ESTIMATION record options |
DERIV1 |
$ABBREVIATED |
DERIV2 |
$ABBREVIATED |
DES |
$ABBREVIATED ADVAN10 ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 Control7 example $DES DES DES AES: ICALL, IDEFD, IDEFA INTERPOLATION IN $DES Michaelis_Menten example PK_PD_simultaneous_2 example PK_PD_simultaneous_4 example SS6 SS9 $SUBROUTINES |
$DES |
Control7 example |
DES |
Control7 example |
$DES |
$DES |
DES |
DES |
DES_DER |
Diff Eq Solver Settings |
$DESIGN |
$DESIGN (NM75) |
DF |
Bayes Example 10 Bayes Example 10l $ESTIMATION record options |
DF, DFS |
$CHAIN $ESTIMATION, $ESTM |
DFS |
$ESTIMATION record options |
DIAGONAL |
$OMEGA $SIGMA |
DIM |
CONTR: III, DIM |
DIMCNS |
SIZES FSIZES prsizes |
DIMFN |
SIZES FSIZES prsizes |
DIMNEW |
SIZES FSIZES prsizes |
DIMQ |
SIZES FSIZES prsizes |
DIMTMP |
SIZES FSIZES prsizes |
DIMTOK |
SIZES FSIZES prsizes |
DIMVRB |
SIZES FSIZES prsizes |
DIRECT |
Bayes Example 1B $ESTIMATION, $ESTM $ESTIMATION record options |
DISPLAY |
$PRIOR |
DN |
Dose event record Duration parameter $PK PK |
Dnnnnn |
$TABLE |
DO |
Abbreviated code SIMETA Transit Compartment Examples |
DO2TEST |
nmfe utility program |
DOE |
DOEXPAND |
DOEXPAND |
DOEXPAND |
DOPDE |
DOEXPAND |
DOSE |
$BIND Bind example TDM example |
DOSREC |
$AES AES $BIND $DES DES Dose Record: DOSREC Dose Time Non-Event: DOSTIM $PK |
DOSTIM |
$AES AES $BIND $DES DES Dose Record: DOSREC Dose Time Non-Event: DOSTIM $PK |
DOUBLE, DP, D |
SUBROUTINE $SUBROUTINES |
DOWHILE |
$ABBREVIATED |
DO-WHILE |
Abbreviated code |
DOWHILE |
Abbreviated code |
DO-WHILE |
SIMETA |
DOWHILE |
SIMETA |
DO-WHILE |
Transit Compartment Examples |
DOWHILE |
Transit Compartment Examples |
DOWHILE, ENDDO |
Data_Average block Expectation block Initialization-Finalization block PASS SIMETA Simulation block |
DP |
AES DES |
DPSIZE |
SIZES FSIZES prsizes |
DROP |
$BIND $DATA DATE data item $INPUT Simulation_1 example |
DT |
AES DES |
DV |
Control5 example DATA_SET DV and MDV data items INDIVIDUALS $INPUT OBSERVATION RECORDS |
DV_ITM |
CONTR: Y DATA NOBS |
DV_ITM2 |
CCONTR: Y, DATA, N1, N2, DIM |
DV_LOQ, DV_LAQ |
NPD, NPDE, NPDE_MODE, DV_LOQ, CD |
E |
$COVARIANCE, $COVR |
ECWRES |
$SCATTERPLOT $TABLE |
EFIRSTDOS |
Additional_Record_Counters |
EFIRSTOBS |
Additional_Record_Counters |
EFIRSTREC |
Additional_Record_Counters |
ELASTDOS |
Additional_Record_Counters |
ELASTOBS |
Additional_Record_Counters |
ELASTREC |
Additional_Record_Counters |
ELS |
ELS |
EM |
Aneal $ESTIMATION, $ESTM |
EMPTY |
SIZES FSIZES prsizes |
E(n) |
ADVAN9_15 $AES AES |
ENDDOE |
DOEXPAND |
ENDPDE |
DOEXPAND |
Ennnnn |
$TABLE |
EONLY |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 7r $ESTIMATION, $ESTM $ESTIMATION record options |
EPRED |
$SCATTERPLOT $TABLE |
EPS |
Simulation: ETA, EPS |
EPS(n) |
$ERROR ERROR Intra and inter-individual $PRED PRED Random models $SIGMA |
EQN |
$DATA |
EQUILIBRIUM |
$MODEL |
ERES |
$SCATTERPLOT $TABLE |
ERR(n) |
$ERROR Intra and inter-individual $PRED Random models |
ERROR |
CALL data item CALLFL Calling protocol phrase $ERROR ERROR PK_PD_sequential_1 example PK_PD_sequential_2 example PK_PD_simultaneous_1 example PK_PD_simultaneous_2 example PK_PD_simultaneous_3 example PK_PD_simultaneous_4 example State Vector: A State Vector Time: TSTATE $SUBROUTINES |
$ERROR |
Control3 example $ERROR |
ERROR |
ERROR |
ERRORMAXIMUM, EMAX |
$WARNINGS |
ESAMPLE |
$TABLE |
ESTIMATION, ESTM |
$CHAIN $ESTIMATION, $ESTM Phenobarb example |
$ESTIMATION, $ESTM |
$CHAIN |
ESTIMATION, ESTM |
$CHAIN |
$ESTIMATION, $ESTM |
$ESTIMATION, $ESTM $ESTIMATION record options Phenobarb example |
ESTIMATION, ESTM |
Phenobarb example |
ETA |
Non-active ETA list for PRED Simulation: ETA, EPS Write print |
ETA1-ETA9, ET10-ET70 |
$TABLE |
ETABARCHECK |
$ESTIMATION record options ETABAR |
ETABARCHECK, NOETABARCHECK |
$ESTIMATION, $ESTM |
ETADER |
$ESTIMATION, $ESTM $ESTIMATION record options |
ETA, ETAS |
$TABLE |
ETA(n) |
$ERROR ERROR $ETAS, $PHIS Intra and inter-individual $OMEGA $PK PK $PRED PRED Random models $RCOV, $RCOVI $TABLE |
ETAn |
$TABLE |
ETAS |
$NONPARAMETRIC Nonparametric example |
$ETAS |
$ETAS, $PHIS |
ETASAMPLES |
$ESTIMATION, $ESTM |
ETASTYPE |
$ESTIMATION, $ESTM $ESTIMATION record options ETASXI |
ETASXI |
$ESTIMATION, $ESTM ETASXI NONMEM modules variables in modules |
ETC |
$ETAS, $PHIS |
ETEXT |
PRED Error Message |
ETS |
NONMEM output files |
EVALSHRINK |
$ESTIMATION, $ESTM $ESTIMATION record options |
EVENT |
Calling protocol phrase |
EVERY |
Calling protocol phrase |
EVID |
EVID data item $INPUT Interoccasion_variability example |
EVTREC |
Dose Time Non-Event: DOSTIM ERROR EVENT RECORD: EVTREC PK |
EWRES |
$SCATTERPLOT $TABLE |
EXAMPLE2.CTL |
Bayes Example 2 |
EXCLUDE |
$MODEL |
EXCLUDE_BY |
Ignore_accept example $TABLE |
EXIT |
Abbreviated code $ESTIMATION, $ESTM Interoccasion_variability example $THETA |
EXP |
Abbreviated code |
EXPAND |
$NONPARAMETRIC |
EXPECTATION-MAXIMIZATION |
Aneal $ESTIMATION, $ESTM |
EXTRADOSE |
FINEDATA |
F |
CCONTR: F, G, H CONTR: F, G, H $ERROR ERROR PRED |
F0, FO |
Output fraction parameter $PK PK Plasma urine example |
F1 |
Bind example TDM example |
F1-F9 |
Dose event record $PK |
FACTOR |
ADVAN7: FACTOR |
FACTORIAL |
Abbreviated code |
FAST |
$COVARIANCE, $COVR $ESTIMATION, $ESTM |
FASTDER |
$ABBREVIATED |
FDATA.CSV |
$DATA |
F_FLAG |
Bayes Example 10 Bayes Example 10l F_FLAG MDVRES |
FGH |
NONMEM output files |
FILE |
$CHAIN $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options FINEDATA NMTEMPLATE $TABLE |
filename |
$DATA $ESTIMATION, $ESTM INCLUDE $MSFI $NONPARAMETRIC $RCOV, $RCOVI RECORDS=ID Example RECORDS=ID Example 2 $TABLE |
FILES |
FILES |
FIN |
FINISH |
FINAL |
Nonparametric example $SIMULATION |
FINEDATA |
DDEXPAND Finedata example |
FIRST |
Calling protocol phrase Superproblem_2 example |
FIRSTDOS |
Additional_Record_Counters |
FIRSTEM |
Partial Derivative Indicators |
FIRSTEM, IFIRSTEM |
$SIMULATION |
", "FIRST, "LAST, "MAIN |
Finalization example ($PRED and $INFN) |
FIRST, LAST, MAIN |
Finalization example ($PRED and $INFN) |
", "FIRST, "LAST, "MAIN |
Verbatim code |
FIRST, LAST, MAIN |
Verbatim code |
FIRSTLASTONLY |
$TABLE |
FIRSTOBS |
Additional_Record_Counters |
FIRSTONLY, FIRSTRECORDONLY |
$SCATTERPLOT $TABLE |
FIRSTREC |
Additional_Record_Counters |
FIXED |
INITIAL ESTIMATE (INITIAL EST) $OMEGA $OMEGAP, $OMEGAPD PK_PD_sequential_2 example $SIGMA $SIGMAP, $SIGMAPD Simulation_3 example $THETA $THETAP, $THETAPV |
FIXEDETAS |
$TABLE |
FL |
SIZES FSIZES prsizes |
FL1 |
CONTR: F, G, H |
FL2 |
CCONTR: F, G, H |
FLIBR |
SIZES FSIZES prsizes |
FLU |
FLU |
FMT |
WRITE Formats |
FMTN |
$FORMAT |
FN |
Bioavailability fraction parameter Dose event record $PK PK |
FNLETA |
$ESTIMATION, $ESTM $ESTIMATION record options FNLETA |
Fnnnnn |
$TABLE |
FO, NOFO |
$ESTIMATION, $ESTM |
FOR |
Non-active ETA list for PRED |
FORMAT |
$CHAIN $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options $ETAS, $PHIS $FORMAT FORMAT $TABLE |
$FORMAT |
$FORMAT |
FORMAT |
$FORMAT |
FORWARD |
Superproblem_1 example Superproblem_2 example $TABLE |
FPARAFILE |
$ESTIMATION, $ESTM $ESTIMATION record options |
FPOSDEF |
$COVARIANCE, $COVR |
FROM |
$SCATTERPLOT $TABLE |
FSD |
SIZES FSIZES prsizes |
FSD1 |
SIZES FSIZES prsizes |
FTL |
DDEXPAND FINEDATA |
FULL |
$ABBREVIATED DES DES AES: ICALL, IDEFD, IDEFA |
FUNC, FUNCA-FUNCI |
Abbreviated Function |
FUNC, FUNCA-FUNCZ |
Abbreviated code Abbreviated Function Examples PHI Stubs Transit Compartment Examples |
FUNCTION |
$ABBREVIATED BIVARIATE FUNCTION |
G |
CCONTR: F, G, H CONTR: F, G, H ERROR PRED |
G11, G21, G31 |
$TABLE |
G2 |
CCONTR: F, G, H CONTR: F, G, H |
GAMLN |
Abbreviated code |
GAMLN, GAMLND1, GAMLND2 |
GAMLN |
GAMMA |
Abbreviated code $PK TRANS6 |
GETETA |
ERROR Finalization example ($PRED and $INFN) GETETA INFN PASS PK PRED |
GG |
PK TRANS (subroutine) |
GGL1 |
CONTR: F, G, H |
GGL2 |
CCONTR: F, G, H |
GK1, HK1 |
$TABLE |
GL1 |
CONTR: F, G, H |
GL2 |
CCONTR: F, G, H |
GRD |
Bayes Example 2 $ESTIMATION, $ESTM $ESTIMATION record options NONMEM output files |
GRDQ |
$ESTIMATION, $ESTM $ESTIMATION record options |
GRID |
$ESTIMATION, $ESTM $ESTIMATION record options Stieltjes example |
H |
CCONTR: F, G, H CONTR: F, G, H ERROR PRED |
H11, H21 |
$TABLE |
HINIT_, |
HINIT_, HMIN_, HMAX_ (NM760) |
HL1 |
CONTR: F, G, H |
HL2 |
CCONTR: F, G, H |
HMAX_ |
HINIT_, HMIN_, HMAX_ (NM760) |
HMIN_, |
HINIT_, HMIN_, HMAX_ (NM760) |
HYBRID |
$ESTIMATION, $ESTM $ESTIMATION record options |
IACCEPT |
Bayes Example 10 Bayes Example 10l $CHAIN $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options |
IACCEPTL |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options |
IATT |
MODEL |
ICALL |
Abbreviated code CONTR Data_Average block DES AES: ICALL, IDEFD, IDEFA Displayed PRED-Defined Items $ERROR ERROR Expectation block Finalization example ($PRED and $INFN) INFN Infn_interpolation example 1 Infn_interpolation example 2 Initialization-Finalization block Mixture_model example PASS NEWIND: NWIND PASS: PASSRC $PK PK $PRED PRED Simulation_3 example Simulation block SPTWO |
ICMAX |
$PRIOR PRIOR Simulation: ICMAX |
ID |
Control5 example DATA_SET ID .ID. and L1 data items INDIVIDUALS $INPUT RECORDS=ID Example RECORDS=ID Example 2 SIMETA |
IDEF |
ERROR PK |
IDEFA |
AES DES AES: ICALL, IDEFD, IDEFA |
IDEFD |
DES AES: ICALL, IDEFD, IDEFA |
IDFORMAT |
FORMAT $TABLE |
IDNO |
MODEL |
IERC, IERE |
Estim Covar Error Codes Finalization example ($PRED and $INFN) Initialization-Finalization block |
IERPRD |
PRED Error Message PRED Exit Code |
IERPRDU |
PRED Exit Code |
IERSQ |
Simulation: SIMEPS Error Code |
IETAOL, IEPSOL |
Simulation: IETAOL IEPSOL |
IF |
Abbreviated code |
IFIRSTEM |
Partial Derivative Indicators |
IFND |
$PRIOR TNPRI TNPRI examples |
IGNORE |
$DATA ICALL Ignore_accept example PRED PRED_IGNORE_DATA BLOCK (NM75) Simulation_1 example Simulation_2 example |
II |
Bind example Dose event record Empirical SS dose event record Exogenous supplementation example II data item $INPUT Interoccasion_variability example SS dose event record TDM example |
IIDX |
Objective Function Value Individual Objective Function Value Individual exampl |
IIDX, CNTID |
Write print |
III |
CONTR: III, DIM |
IKAPPA |
$ESTIMATION record options |
IMAX |
Diff Eq Solver Settings |
IMP |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6s Bayes Example 6sb Bayes Example 7r $ESTIMATION, $ESTM NONMEM output files |
IMPMAP |
$ESTIMATION, $ESTM $ESTIMATION record options |
INCLUDE |
$DATA INCLUDE RECORDS=ID Example RECORDS=ID Example 2 User-defined Reserved Function Example |
$INDEX, $INDXS |
$INDEX, $INDXS |
INDEX, INDXS, INDEXES |
ERROR $INDEX, $INDXS INFN PK PRED |
INDIVIDUAL |
Calling protocol phrase |
INDR1 |
NINDR INDR1 INDR2 |
INDR2 |
NINDR INDR1 INDR2 |
INFILE |
$DATA RECORDS=ID Example RECORDS=ID Example 2 |
$INFILE |
$DATA RECORDS=ID Example RECORDS=ID Example 2 |
INF, INFINITY |
$THETA |
INFN |
$INFN INFN PASS PASS NEWIND: NWIND Stubs $SUBROUTINES SUPP |
$INFN |
$INFN |
INFN |
Finalization example ($PRED and $INFN) Finedata example $INFN INFN Infn_interpolation example 1 Infn_interpolation example 2 Initialization-Finalization block |
INFNP |
INFN-defined Variables |
INIT |
AES |
INITIAL |
$SIMULATION |
INITIALOFF, INITIALON |
$MODEL Three_compartment example |
INPUT |
$BIND $INPUT $OMIT |
$INPUT |
$BIND |
INPUT |
Bind example |
$INPUT |
Control3 example DATA_ITEMS DATA_RECORDS DATA_SET $INPUT |
INT |
Abbreviated code |
INTEGER |
$ABBREVIATED |
INTERACTION |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
INTERPTYPE |
$TABLE |
INTFLG |
Diff Eq Solver Settings |
IPH |
NONMEM output files |
IPRNV |
Super Problem Print Control |
IPROB |
Problem Iteration Counters |
IPS |
Population single-Subject Indicator |
IR |
AES Calling protocol phrase DES MODEL |
I_REC |
Recursive PRED Indicator |
IRECIDX |
Additional_Record_Counters Moving Area Under the Curve Example |
IREP |
Simulation: NREP, IREP |
IREV |
ERROR PK |
IRGG |
PK TRANS (subroutine) |
ISAMPEND |
$ESTIMATION, $ESTM $ESTIMATION record options |
ISAMPLE |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r $CHAIN $ESTIMATION, $ESTM $ESTIMATION record options |
ISAMPLE_M1 |
$ESTIMATION record options |
ISAMPLE_M1A |
$ESTIMATION record options |
ISAMPLE_M1B |
$ESTIMATION, $ESTM $ESTIMATION record options |
ISAMPLE_M1, ISAMPLE_M1A |
$ESTIMATION, $ESTM |
ISAMPLE_M2 |
$ESTIMATION record options |
ISAMPLE_M2, ISAMPLE_M3 |
$ESTIMATION, $ESTM |
ISAMPLE_M3 |
$ESTIMATION record options |
ISAMPLEMAX |
SIZES FSIZES prsizes |
ISCALE_MAX |
$ESTIMATION record options |
ISCALE_MIN |
$ESTIMATION record options |
ISCALE_MIN, ISCALE_MAX, IKAPPA |
$ESTIMATION, $ESTM |
ISFINL |
$AES $DES DES AES: ISFINL |
ISIZE |
SIZES FSIZES prsizes |
I_SS |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 |
ISS |
Initial Steady State example |
I_SS |
Initial Steady State example Initial Steady State: I_SS, ISSMOD $MODEL |
ISS |
NWPRI NWPRI examples |
I_SS |
$PK |
ISS |
$PRIOR PRIOR TNPRI TNPRI examples |
ISSMOD |
Initial Steady State: I_SS, ISSMOD |
ISTFLG |
Diff Eq Solver Settings |
ITASK_ |
STOP_TIME, ITASK_ (NM75) |
ITERATION |
$ETAS, $PHIS |
ITERATIONS |
Problem Iteration Counters $SUPER Superproblem_1 example Superproblem_2 example |
ITRANS |
TRANS (subroutine) |
ITS |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r $ESTIMATION, $ESTM $ESTIMATION record options |
ITYP |
NWPRI NWPRI examples $PRIOR PRIOR TNPRI TNPRI examples |
IVAR |
$PRIOR TNPRI TNPRI examples |
IWRB |
SIZES FSIZES prsizes |
IWRE |
SIZES FSIZES prsizes |
K |
ADVAN1 ADVAN11 ADVAN12 ADVAN2 ADVAN3 ADVAN4 $PK |
K12, K21 |
ADVAN11 ADVAN3 $PK |
K13, K31 |
ADVAN11 $PK |
K21, K31, K32, K42 |
TRANS6 |
K23, K32 |
ADVAN12 ADVAN4 $PK |
K24, K42 |
ADVAN12 $PK |
KA |
ADVAN12 ADVAN2 ADVAN4 Exogenous supplementation example $PK TRANS2 TRANS3 TRANS4 TRANS5 TRANS6 |
KAPPA |
$ESTIMATION, $ESTM $ESTIMATION record options |
KCALL |
CONTR: KCALL |
KM |
ADVAN10 |
KM0, KMN |
ADVAN5 ADVAN7 $PK |
KNUTHSUMOFF |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options |
L1 |
ID .ID. and L1 data items $INPUT SIMETA |
L1, L2 |
CCONTR: Y, DATA, N1, N2, DIM |
L2 |
CCONTR: F, G, H CONTR: III, DIM Correlation Across L2 Records $INPUT L2 data item Plasma urine example SIMEPS |
L2CR_DIM |
CCONTR: Y, DATA, N1, N2, DIM |
L2NO |
CCONTR: Y, DATA, N1, N2, DIM |
LABEL |
$OMEGA $SIGMA $THETA |
LADD |
SIZES FSIZES prsizes |
LAGGED |
Calling protocol phrase |
LAPLACE |
$ESTIMATION record options |
LAPLACIAN, LAPLACEAN |
$ABBREVIATED Bayes Example 10 Bayes Example 10l ERROR $ESTIMATION, $ESTM $ESTIMATION record options Logistic regression example PRED |
LAST |
$BIND $TABLE |
LAST20 |
$DATA |
LASTDOS |
Additional_Record_Counters |
LASTOBS |
Additional_Record_Counters |
LASTONLY |
$TABLE |
LASTREC |
Additional_Record_Counters |
LBSIZE |
SIZES FSIZES prsizes |
LCM110 |
SIZES FSIZES prsizes |
$LDFOLD |
$LDFOLD |
LEVCENTER |
$ESTIMATION, $ESTM |
LEVEL |
$LEVEL |
$LEVEL |
$LEVEL |
LEVWT |
$ESTIMATION, $ESTM $ESTIMATION record options |
LFORMAT |
FORMAT $TABLE |
LICFILE, LICFILE |
nmfe utility program |
LIKE |
$ESTIMATION record options |
LIKELIHOOD |
Expectation example Logistic regression example NCONTR PRED PRED_RES_WRES |
LIM1 |
SIZES FSIZES prsizes |
LIM10 |
SIZES FSIZES prsizes |
LIM11 |
SIZES FSIZES prsizes |
LIM13 |
SIZES FSIZES prsizes |
LIM15 |
SIZES FSIZES prsizes |
LIM16 |
SIZES FSIZES prsizes |
LIM2 |
SIZES FSIZES prsizes |
LIM3 |
SIZES FSIZES prsizes |
LIM4 |
SIZES FSIZES prsizes |
LIM5 |
SIZES FSIZES prsizes |
LIM6 |
SIZES FSIZES prsizes |
LIM7 |
SIZES FSIZES prsizes |
LIM8 |
SIZES FSIZES prsizes |
LINK |
$MODEL MODEL |
LIREC |
Moving Area Under the Curve Example Size of Individual Record |
LIST |
Non-active ETA list for PRED $WARNINGS |
LL, LOGLIKELIHOOD |
$ESTIMATION, $ESTM Logistic regression example |
LNP4 |
PRED-Defined Variables SIZES FSIZES prsizes |
LNTWOPI |
$ESTIMATION, $ESTM $ESTIMATION record options |
LOCFILE |
nmfe utility program |
LOG, LOG10 |
Abbreviated code |
LOVOBJTYPE |
$ESTIMATION, $ESTM |
LPAR |
SIZES FSIZES prsizes |
LPAR2 |
SIZES FSIZES prsizes |
LPAR3 |
SIZES FSIZES prsizes |
LRECL |
$DATA |
LS_ALLOC1 |
SIZES FSIZES prsizes |
LS_ALLOC2 |
SIZES FSIZES prsizes |
LS_DIM |
CONTR: III, DIM |
LSTEXT |
SIZES FSIZES prsizes |
LSUPP |
$NONPARAMETRIC SIZES FSIZES prsizes |
LTH |
SIZES FSIZES prsizes |
LVOUT |
Non-active ETA list for PRED |
LVR |
SIZES FSIZES prsizes |
LVR2 |
SIZES FSIZES prsizes |
LVRM |
SIZES FSIZES prsizes |
LWS1 |
SIZES FSIZES prsizes |
LWS2 |
SIZES FSIZES prsizes |
LWS3 |
SIZES FSIZES prsizes |
M |
Active ETA list for PREDPP |
M1 |
$ESTIMATION, $ESTM |
M1A |
$ESTIMATION, $ESTM |
M1B |
$ESTIMATION, $ESTM |
M2 |
$ESTIMATION, $ESTM |
M3 |
$ESTIMATION, $ESTM |
MADAPT |
$ESTIMATION, $ESTM $ESTIMATION record options |
MAP |
$ESTIMATION, $ESTM $ESTIMATION record options |
MAPCOV |
$ESTIMATION, $ESTM $ESTIMATION record options |
MAPINTER |
$ESTIMATION record options |
MAPINTER, MAPITER, MAPITERS |
$ESTIMATION, $ESTM |
MAPITER |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 7r $ESTIMATION record options |
MAPITERS |
$ESTIMATION record options |
MARGINAL |
$NONPARAMETRIC Nonparametric Density: DEN_, CDEN_ Nonparametric example |
MASSRESET |
$ESTIMATION record options |
MATRIX |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $COVARIANCE, $COVR |
MAX |
Abbreviated code |
MAXCAL |
Diff Eq Solver Settings |
MAXDIMM |
SIZES FSIZES prsizes |
MAXDIMZ |
SIZES FSIZES prsizes |
MAXETAI |
SIZES FSIZES prsizes |
MAXEVAL |
$ESTIMATION record options |
MAXEVALS |
Control3 example $ESTIMATION, $ESTM MONITORING OF SEARCH |
MAXEXTRA |
SIZES FSIZES prsizes |
MAX_EXTRA |
SIZES FSIZES prsizes |
MAXFCN |
Diff Eq Solver Settings SIZES FSIZES prsizes |
MAXFTEXT |
SIZES FSIZES prsizes |
MAXIC |
SIZES FSIZES prsizes |
MAXIDS |
Objective Function Value Individual Objective Function Value Individual exampl SIZES FSIZES prsizes |
MAXITER |
SIZES FSIZES prsizes |
MAXLIM |
nmfe utility program |
MAXNSP |
SIZES FSIZES prsizes |
MAXOMEG |
SIZES FSIZES prsizes |
MAXOMEGL |
SIZES FSIZES prsizes |
MAXOTHER |
SIZES FSIZES prsizes |
MAXPARW |
SIZES FSIZES prsizes |
MAXPHICOVI |
SIZES FSIZES prsizes |
MAXPTHETA |
SIZES FSIZES prsizes |
MAXRECID |
SIZES FSIZES prsizes |
MAXSIDL |
SIZES FSIZES prsizes |
MAXSIDS |
SIZES FSIZES prsizes |
MAXVRESN |
SIZES FSIZES prsizes |
MAXVRESWRES |
SIZES FSIZES prsizes |
MAXXNAME |
SIZES FSIZES prsizes |
MCETA |
$ESTIMATION, $ESTM $ESTIMATION record options |
MDV |
DV and MDV data items $INPUT Multiple_dose example OBSERVATION RECORDS Phenobarb example |
MDVI1 |
DV and MDV data items |
MDVI2 |
DV and MDV data items |
MDVI3 |
DV and MDV data items |
MDVRES |
MDVRES NONMEM modules variables in modules |
METH |
Diff Eq Solver Settings |
METHOD |
$ABBREVIATED $ESTIMATION, $ESTM |
MFIRST |
Partial Derivative Indicators |
MIN |
Abbreviated code |
MISDAT |
$DATA |
MISSING |
FINEDATA Finedata example NMTEMPLATE |
MITER |
Diff Eq Solver Settings |
MIX |
$CONTR $MIX MIX MIX CONTR: THETA MIX: DATA MIXNUM_MIXEST_MIXP Mixture_model example Stubs $SUBROUTINES |
$MIX |
$MIX |
MIX |
$MIX MIX MIXNUM_MIXEST_MIXP |
MIXNUM, MIXEST, MIXP |
MIXNUM_MIXEST_MIXP Mixture_model example Mixture model: MIXNUM, MIXEST Mixture model: MIXP |
MIXP |
$MIX |
MIXPT |
Mixture model: MIXPT |
MMX |
SIZES FSIZES prsizes |
MNEXT |
Enterhepatic circulation examples Examples Using MTIME to Model Periodic Model Event Time: MNOW, MPAST, MNEX Model Time examples MTIME MNEXT MPAST MNOW MTDIFF |
MNOW |
Enterhepatic circulation examples Examples Using MTIME to Model Periodic Model Event Time: MNOW, MPAST, MNEX Model Time examples MTIME MNEXT MPAST MNOW MTDIFF |
MOD |
Abbreviated code |
MODE |
Finalization example ($PRED and $INFN) INFN Infn_interpolation example 1 Infn_interpolation example 2 Initialization-Finalization block PASS $PRIOR TNPRI TNPRI examples |
MODEL |
ADVAN5 ADVAN7 ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 ADVAN (general) Control6 example Control7 example $MODEL MODEL $SUBROUTINES |
$MODEL |
Control6 example |
MODEL |
Control6 example |
$MODEL |
Control7 example |
MODEL |
Control7 example |
$MODEL |
$MODEL |
MODEL |
MODEL |
MPAST |
Enterhepatic circulation examples Examples Using MTIME to Model Periodic Model Event Time: MNOW, MPAST, MNEX Model Time examples MTIME MNEXT MPAST MNOW MTDIFF |
MRG_ |
Displayed PRED-Defined Items Expectation block Expectation example $INPUT MRG_ data item |
MSEC |
Partial Derivative Indicators |
MSFI |
Model Specification file $MSFI Nonparametric example |
$MSFI |
$MSFI |
MSFO |
$ESTIMATION, $ESTM $ESTIMATION record options Model Specification file Multiple_dose example $NONPARAMETRIC |
MSFTEST |
$MSFI |
MTDIFF |
Enterhepatic circulation examples Examples Using MTIME to Model Periodic Model Event Time: MNOW, MPAST, MNEX Model Event Time: MTDIFF Model Time examples MTIME MNEXT MPAST MNOW MTDIFF |
MTHVR |
SIZES FSIZES prsizes |
MTIME |
Enterhepatic circulation examples Examples Using MTIME to Model Periodic MINIMUM VALUE OF OBJ. FUNCTION Model Event Time: MNOW, MPAST, MNEX Model Event Time: MTIME Model Time examples Moving Area Under the Curve Example MTIME MNEXT MPAST MNOW MTDIFF $PK |
MU_ |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 |
MULT |
MULT |
MUM |
$ESTIMATION, $ESTM $ESTIMATION record options |
MXNAME |
SIZES FSIZES prsizes |
MXSTEP |
MXSTEP |
NACTIV |
Active ETA list for PREDPP |
NAETA |
Non-active ETA list for PRED |
NAMES |
$OMEGA $SIGMA $THETA |
NBURN |
Aneal Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
NCM |
MODEL |
NCM1 |
$AES $AESINITIAL |
NCM, NCOMPS, NCOMPARTMENTS |
$MODEL |
NCONTR |
NCONTR |
NDREC |
Additional_Record_Counters Record Counters: NIREC, NDREC |
NEN |
$DATA |
NEPP |
NWPRI NWPRI examples $PRIOR PRIOR |
NEPS |
NWPRI NWPRI examples $PRIOR PRIOR |
NEQUILIBRIUM |
$MODEL |
NETA |
Bayes Example 1B NWPRI NWPRI examples $PRIOR PRIOR |
NETAS |
PK TRANS (subroutine) |
NETEXT |
PRED Error Message PRED Exit Code |
NETP |
Bayes Example 1B Bayes Example 6s Bayes Example 6sb NWPRI NWPRI examples $OMEGAP, $OMEGAPD $PRIOR PRIOR |
NEVAL |
FINEDATA Finedata example NMTEMPLATE |
NEW |
Calling protocol phrase SIMEPS SIMETA $SIMULATION Verbatim code |
NEWBIO |
Bioavailability Behavior |
NEWIND |
$ERROR Finalization example ($PRED and $INFN) INFN Initialization-Finalization block New Individual Indicator: NEWIND PASS NEWIND: NWIND $PK $PRED PRED |
NEWL2 |
$ERROR PASS New L2 record: NEWL2 $PRED |
NEWND |
PASS |
NEXT |
$BIND Bind example |
NFSIZES |
SIZES FSIZES prsizes |
NFUNCX |
SIZES FSIZES prsizes |
NINDR |
NINDR INDR1 INDR2 Objective Function Value Individual exampl |
NIREC |
Additional_Record_Counters Record Counters: NIREC, NDREC |
NITER |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
NL2_OBS |
CCONTR: Y, DATA, N1, N2, DIM |
NL2_RECS |
CONTR: III, DIM |
NLUSER |
SIZES FSIZES prsizes |
NMPR1 |
Repetition_1 example Repetition_2 example |
NMPR10 |
Repetition Variables Simulation: ETA, EPS |
NMPR11 |
Simulation: IETAOL IEPSOL |
NMPR12 |
YLO example |
NMPR12, YLO, YUP |
YLO YUP YLO YUP Probability: PR_Y |
NMPR13, NMPR14, CTLO, CTUP |
CTLO CTLO CTUP Probability: PR_CT CTUP |
NMPR15 |
SKIP |
NMPR16 |
NWPRI NWPRI examples PRIOR PRIOR Simulation: Parameters TNPRI |
NMPR17 |
F_FLAG |
NMPR50 |
PRIOR Simulation: ICMAX |
NMPRD10 |
Abbreviated code |
NMPRD15 |
Abbreviated code |
NMPRD1, NMPRD2 |
PRED Error Message PRED Exit Code |
NMPRD3 |
$ABBREVIATED COMACT, COMSAV COM COMACT COMSAV COMRES |
NMPRD4 |
$ABBREVIATED Abbreviated code COMACT, COMSAV COM COMACT COMSAV COMRES Displayed PRED-Defined Items $PRED PRED-Defined Variables |
NMPRD5 |
Correlation Across L2 Records |
NMPRD5, NMPR6 |
Simulation: SIMEPS Error Code |
NMPRD7 |
Abbreviated code ERROR Simulation: ETA, EPS |
NMPRD8 |
Recursive PRED Indicator |
NMPRD9 |
PASS PASS: PASSRC |
:nnn |
$TABLE |
NO |
$ABBREVIATED SIZES FSIZES prsizes |
NOABORT |
Abbreviated code $ESTIMATION, $ESTM $ESTIMATION record options Interoccasion_variability example $THETA |
NOABORTFIRST |
$THETA |
NOABS0, NOABSZERO |
$SCATTERPLOT |
NOAPPEND |
$TABLE |
NOBS |
CCONTR: Y, DATA, N1, N2, DIM CONTR: Y DATA NOBS |
NOBSIND2 |
CONTR: Y DATA NOBS |
NOBUILD |
nmfe utility program |
NOCHECKMU |
$ABBREVIATED |
NOCOMMON |
$ABBREVIATED |
NOCOV |
$ESTIMATION, $ESTM $ESTIMATION record options |
NOFASTDER |
$ABBREVIATED Partial Derivative Indicators |
NOFCOV |
$COVARIANCE, $COVR |
NOFDATACSV |
$DATA |
NOFIRSTDERCODE |
$ABBREVIATED |
NOFORWARD |
Superproblem_1 example Superproblem_2 example $TABLE |
NOHABORT |
$ESTIMATION, $ESTM $ESTIMATION record options |
NOHEADER |
Simulation_1 example Simulation_2 example $TABLE |
NOINTERACTION |
$ESTIMATION, $ESTM |
NOLABEL |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options $TABLE |
NOLAPLACIAN, NOLAPLACEAN |
$ESTIMATION, $ESTM |
NOMSFTEST |
$MSFI |
NON-ACTIVE |
Non-active ETA list for PRED |
NONE |
$LDFOLD $WARNINGS |
NON-EVENT |
Calling protocol phrase |
NONINFETA |
$ESTIMATION, $ESTM $ESTIMATION record options |
NONPARAMETRIC |
RANDMT, RANDMTU RANDOM $SIMULATION |
NONPARAMETRIC, NONP |
COMACT, COMSAV Displayed PRED-Defined Items $NONPARAMETRIC Nonparametric Density: DEN_, CDEN_ Nonparametric example |
$NONPARAMETRIC, NONP |
$NONPARAMETRIC Nonparametric Density: DEN_, CDEN_ Nonparametric example |
NOOFF |
$MODEL |
NOOPEN |
$DATA Superproblem_1 example Superproblem_2 example |
NOORD0, NOORDZERO |
$SCATTERPLOT |
NOPOSTHOC |
$ESTIMATION, $ESTM |
NOPREDICTION |
$SIMULATION |
NOPRINT |
Phenobarb example Simulation_1 example Simulation_2 example $SUPER Superproblem_1 example Superproblem_2 example $TABLE |
NOPRIOR |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 $ESTIMATION, $ESTM $ESTIMATION record options |
NOREPEAT, NOREPEAT1, NOREPEAT2 |
$ESTIMATION, $ESTM |
NOREPLACE |
$SIMULATION |
NORESCALE |
$MSFI |
NORESET |
$WARNINGS |
NOREWIND |
$DATA RECORDS=ID Example RECORDS=ID Example 2 $SIMULATION |
NORMAL |
RANDMT, RANDMTU RANDOM $SIMULATION Simulation_2 example |
NOSLOW |
$COVARIANCE, $COVR $ESTIMATION, $ESTM |
NOSUB |
$ABBREVIATED $DEFAULT $ESTIMATION, $ESTM $ESTIMATION record options $SCATTERPLOT $TABLE |
NOSUPRESET |
$SIMULATION |
NOTITLE |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options $TABLE |
NO-U-TURN |
$ESTIMATION, $ESTM |
NOUTURN |
$ESTIMATION, $ESTM |
NOWIDE |
$DATA |
NPAR |
MODEL |
NPARAMETERS, NPARAMS |
$MODEL |
NPATSMAX |
SIZES FSIZES prsizes |
NPD |
NONMEM output files $SCATTERPLOT $TABLE |
NPDE |
$SCATTERPLOT $TABLE |
NPD, NPDE, NPDE_MODE |
NPD, NPDE, NPDE_MODE, DV_LOQ, CD |
NPDTYPE |
$TABLE |
NPE |
NONMEM output files |
NPESTIM |
$NONPARAMETRIC |
NPEXP |
Bayes Example 6s Bayes Example 6sb NWPRI NWPRI examples $PRIOR PRIOR |
NPI |
NONMEM output files |
NPL |
NONMEM output files |
NPMAXITER |
$NONPARAMETRIC |
NPOPETAS, POPETAS |
$MSFI |
NPOPEXTRA |
SIZES FSIZES prsizes |
NPOP_EXTSIZE |
SIZES FSIZES prsizes |
NPOP_EXTSIZE2 |
SIZES FSIZES prsizes |
NPOPMIXMAX |
SIZES FSIZES prsizes |
NPRED |
$SCATTERPLOT $TABLE |
NPROB |
Problem Iteration Counters |
NPRSIZES |
SIZES FSIZES prsizes |
NPSUPP |
$NONPARAMETRIC |
NPSUPPE |
$NONPARAMETRIC |
NRD |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $SUBROUTINES $TOL TOL |
NRDC |
$TOL TOL |
NREC |
CCONTR: Y, DATA, N1, N2, DIM |
NRECORDS, NRECS, RECORDS, RECS |
$DATA FINISH RECORDS=ID Example RECORDS=ID Example 2 |
NREP |
Simulation: NREP, IREP |
NRES |
$SCATTERPLOT $TABLE |
NRETA |
Active ETA list for PREDPP |
NSAM |
NWPRI NWPRI examples $PRIOR PRIOR TNPRI TNPRI examples |
NSAMPLE |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options |
NSIG |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 7r $ESTIMATION record options Significant Digits from Est. Step |
NSIGDIGITS, SIGDIGITS |
$ESTIMATION, $ESTM |
NSPOP |
$MIX MIX Mixture_model example |
NSTORE |
SIZES FSIZES prsizes |
NSUBS |
CONTR: KCALL Simulation: NREP, IREP |
NSUBS, NSUBPROBLEMS |
$SIMULATION Simulation_2 example Simulation_3 example |
NTHES_, NETAS_, NEPSS_ |
Parameter Dimensions |
NTHETA |
NWPRI NWPRI examples $PRIOR PRIOR $THETAI $THETAR |
NTHP |
Bayes Example 1B Bayes Example 6s Bayes Example 6sb NWPRI NWPRI examples $PRIOR PRIOR $THETAI $THETAR |
NULL |
$DATA Multiple_dose example |
NUMBERPOINTS, NUMPTS |
$THETA |
NUMDER |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUMERICAL |
$ESTIMATION record options |
NUMERICAL, NONUMERICAL |
$ABBREVIATED $ESTIMATION, $ESTM |
NUTS |
$ESTIMATION, $ESTM |
NUTS_BASE |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_DELTA |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_EPARAM |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_GAMMA |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_INIT |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_MASS |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_MAXDEPTH |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_OPARAM |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_REG |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_SPARAM |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_STEPINTER |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_STEPITER |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_TERM |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_TEST |
$ESTIMATION, $ESTM $ESTIMATION record options |
NUTS_TRANSFORM |
$ESTIMATION, $ESTM $ESTIMATION record options |
NVECX |
SIZES FSIZES prsizes |
NVNT |
ERROR |
NWIND |
INFN PASS NEWIND: NWIND |
NWPRI |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 PRIOR PRIOR Simulation: Parameters NWPRI NWPRI examples $PRIOR |
NWRES |
$SCATTERPLOT $TABLE |
OACCEPT |
$ESTIMATION, $ESTM $ESTIMATION record options |
OBJ |
OBJ |
OBJECT |
Finalization example ($PRED and $INFN) Objective Function Value Objective Function Value Individual Objective Function Value Individual exampl |
OBJI |
$SCATTERPLOT $TABLE |
OBSERVATION |
Calling protocol phrase |
OBSONLY |
$SCATTERPLOT |
OCC |
FINEDATA NMTEMPLATE |
OLKJDF |
$ESTIMATION, $ESTM $ESTIMATION record options $OLKJDF |
$OLKJDF |
$OLKJDF |
OLNTWOPI |
$ESTIMATION, $ESTM $ESTIMATION record options |
OMEGA |
FINAL PARAMETER ESTIMATE INITIAL ESTIMATE (INITIAL EST) Intra and inter-individual $OMEGA $OMEGAP, $OMEGAPD Parameters OMEGA SIGMA: Current Write print |
$OMEGA |
Control4 example $OMEGA |
OMEGAF |
Finalization example ($PRED and $INFN) Parameter Values: Initial and Final |
OMEGAP |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 7r Bayes Example 8 NWPRI $OMEGAP, $OMEGAPD |
$OMEGAP |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 7r Bayes Example 8 NWPRI $OMEGAP, $OMEGAPD |
OMEGAPD |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 7r Bayes Example 8 NWPRI $OMEGAP, $OMEGAPD |
$OMEGAPD |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 7r Bayes Example 8 NWPRI $OMEGAP, $OMEGAPD |
OMIT |
Data_average example $OMIT |
$OMIT |
$OMIT RAW_ data item |
OMITTED |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options $SCATTERPLOT $TABLE |
OMSIMP |
NWPRI NWPRI examples PRIOR PRIOR Simulation: Parameters TNPRI Write print |
ONCE |
Calling protocol phrase |
ONEHEADER |
Phenobarb example |
ONEHEADERALL |
$TABLE |
ONEHEADERPERFILE |
$TABLE |
ONLYREAD |
$MSFI |
ONLYSIMULATION, ONLY |
Displayed PRED-Defined Items Plasma urine example $SIMULATION Simulation_1 example Simulation_2 example Simulation: ETA, EPS |
OPEN |
Superproblem_1 example Superproblem_2 example Write print |
OPSCRS |
CONTR SPTWO |
OPTMAP |
$ESTIMATION, $ESTM $ESTIMATION record options |
ORD0, ORDZERO |
Phenobarb example $SCATTERPLOT |
ORDER |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options |
OSAMPLE_M1 |
$ESTIMATION record options |
OSAMPLE_M2 |
$ESTIMATION record options |
OSAMPLE, OSAMPLE_M1, OSAMPLE_M2 |
$ESTIMATION, $ESTM |
OTHER |
Abbreviated Function Abbreviated Function Examples BIVARIATE FUNCTION $SUBROUTINES |
OVARF |
$ESTIMATION, $ESTM $ESTIMATION record options $ovarf |
$OVARF |
$ovarf |
P |
$MIX MIX Mixture_model example |
PACCEPT |
$ESTIMATION, $ESTM $ESTIMATION record options |
PAL |
SIZES FSIZES prsizes |
PARAFILE |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options $NONPARAMETRIC $SIMULATION $TABLE |
PARAFILE, PARAFILE.PNM |
FOCE_PARALLEL example parallel computing |
PARAFILE, PARAFILE.PNM, PARAFILE |
nmfe utility program |
PARAFPRINT |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options nmfe utility program |
PASS |
Finalization example ($PRED and $INFN) INFN Infn_interpolation example 1 Infn_interpolation example 2 PASS PASS NEWIND: NWIND PASS: PASSRC Initialization-Finalization block |
PASSRC |
PASS PASS: PASSRC |
PASTZERO |
PASTZERO (NM75) |
PC |
SIZES FSIZES prsizes |
PCMT |
CMT PCMT data item $INPUT |
PCT |
SIZES FSIZES prsizes |
PCT_BIG |
SIZES FSIZES prsizes |
PD |
SIZES FSIZES prsizes |
PDZ |
PROTECT functions |
PEXP |
PROTECT functions |
PFCOND |
$COVARIANCE, $COVR |
PHC |
$ETAS, $PHIS |
PHE |
PROTECT functions |
PHI |
Abbreviated code $ESTIMATION, $ESTM NONMEM output files NPD, NPDE, NPDE_MODE, DV_LOQ, CD Objective Function Value Individual Objective Function Value Individual exampl |
PHI(n) |
$ETAS, $PHIS $RCOV, $RCOVI |
$PHIS |
$ETAS, $PHIS |
PHM |
$ESTIMATION, $ESTM NONMEM output files |
PIR |
SIZES FSIZES prsizes |
PK |
CALL data item CALLFL Calling protocol phrase $PK PK State Vector: A State Vector Time: TSTATE $SUBROUTINES |
$PK |
Control3 example $PK |
PK |
PK |
PL |
SIZES FSIZES prsizes |
PLEV |
NWPRI NWPRI examples $PRIOR PRIOR TNPRI TNPRI examples |
PLOG |
PROTECT functions |
PLOG10 |
PROTECT functions |
P(n) |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 $AES AES $AESINITIAL $DES DES $PK |
PNG |
PROTECT functions |
Pnnnnn |
$TABLE |
PNP |
PROTECT functions |
POPETAS, NPOPETAS |
$MSFI |
POSDEF |
$COVARIANCE, $COVR |
POSTHOC |
CCONTR Displayed PRED-Defined Items $ESTIMATION, $ESTM $ESTIMATION record options Finalization example ($PRED and $INFN) FNLETA Interoccasion_variability example Phenobarb example $TABLE |
PPR |
SIZES FSIZES prsizes |
PRCOMG |
Diff Eq Solver Settings PREDPP modules |
PRCOMU |
Bioavailability Behavior PREDPP modules |
PRCOMW |
ADVAN7: FACTOR PREDPP modules |
PR_CT |
CTLO CTLO CTUP Probability: PR_CT CTUP |
PRDDE1 |
DES AES: ICALL, IDEFD, IDEFA |
PRDDE1, PRDPK1, PRDPK2, PRDPK3, PRINFN |
PREDPP modules |
PRDFL |
Abbreviated code Repetition_2 example |
PRDPK1 |
Model Event Time: MTIME MTIME MNEXT MPAST MNOW MTDIFF |
PRDPK2 |
Model Event Time: MTDIFF MTIME MNEXT MPAST MNOW MTDIFF |
PRDPK3 |
Compartment Initialization: A_0 Compartment Initialization: A_0FLG Compartment Initialization Block |
PRDPK4 |
Initial Steady State: I_SS, ISSMOD |
PRDPK4, I_SS |
PK |
PRECOND |
$COVARIANCE, $COVR |
PRECONDS |
$COVARIANCE, $COVR |
PRED |
Displayed PRED-Defined Items Non-active ETA list for PRED $PRED PRED PRED_RES_WRES $SCATTERPLOT $SUBROUTINES $TABLE |
$PRED |
Control4 example |
PRED |
Control4 example |
$PRED |
$PRED |
PRED |
PRED |
PREDI |
$SCATTERPLOT $TABLE |
PREDICTION |
$ESTIMATION record options $SIMULATION |
PRETYPE |
$COVARIANCE, $COVR |
PRINFN |
INFN-defined Variables |
PRINT |
Abbreviated code Control3 example $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options MONITORING OF SEARCH $SUPER Superproblem_1 example Superproblem_2 example $TABLE Write print |
PRIOR |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 PRIOR PRIOR Simulation: Parameters $SIMULATION Stubs $SUBROUTINES |
$PRIOR |
NWPRI NWPRI examples $PRIOR TNPRI TNPRI examples |
PRIOR |
NWPRI NWPRI examples $PRIOR PRIOR TNPRI TNPRI examples |
PRIORC |
$ESTIMATION, $ESTM $ESTIMATION record options |
PROBLEM |
$PROBLEM $SIZES $WARNINGS |
$PROBLEM |
Control3 example $PROBLEM |
PROCM1 |
New Individual Indicator: NEWIND |
PROCM1-PROCM13, PROCMA-PROCMC |
PREDPP modules |
PROCM2 |
Dose Time Non-Event: DOSTIM |
PROCM3 |
Dose Record: DOSREC |
PROCM4 |
State Vector: A State Vector Time: TSTATE |
PROCM5 |
Active ETA list for PREDPP |
PROCM6 |
DES AES: THETA |
PROCM7 |
EVENT RECORD: EVTREC |
PROCM8 |
WRITE Formats |
PROCM9 |
State Vector: A State Vector Time: TSTATE |
PROCMA |
Model Event Time: MNOW, MPAST, MNEX MTIME MNEXT MPAST MNOW MTDIFF |
PROCMB |
DES AES: ISFINL |
PROCMC |
Compartment Initialization: A_0 Compartment Initialization: A_0FLG Compartment Initialization Block |
PROTECT |
$ABBREVIATED PROTECT functions |
PRRES |
PRRES |
PRSEQ |
nmfe utility program |
PR_Y |
YLO example YLO YUP YLO YUP Probability: PR_Y |
PSAMPLE_M1 |
Bayes Example 6s $ESTIMATION record options |
PSAMPLE_M2 |
Bayes Example 6s $ESTIMATION record options |
PSAMPLE_M3 |
Bayes Example 6s $ESTIMATION record options |
PSAMPLE, PSAMPLE_M1, PSAMPLE_M2, PSAMPLE_M3 |
$ESTIMATION, $ESTM |
PSCALE_MAX |
$ESTIMATION record options |
PSCALE_MIN |
$ESTIMATION record options |
PSCALE_MIN, PSCALE_MAX |
$ESTIMATION, $ESTM |
PSQRT |
PROTECT functions |
PW |
SIZES FSIZES prsizes |
PZR |
PROTECT functions |
Q |
$PK TRANS3 |
Q2, Q3, Q4 |
$PK |
Q, Q2, Q3, Q4 |
TRANS4 |
R |
$COVARIANCE, $COVR Expectation block Simulation block |
R1-R9 |
Dose event record $PK Rate parameter |
RANDMTU, RANDMT |
RANDMT, RANDMTU |
RANDOM |
RANDOM $SIMULATION Simulation_2 example Expectation block Initialization-Finalization block Simulation block |
RANMETHOD |
$CHAIN $COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options $SIMULATION $TABLE |
RATE |
Dose event record Exogenous supplementation example $INPUT Multiple_dose example RATE data item Rate parameter SS dose event record |
RAW_ |
Data_Average block Data_average example Displayed PRED-Defined Items Expectation example $INPUT $OMIT RAW_ data item |
$RCOV |
$RCOV, $RCOVI |
$RCOVI |
$RCOV, $RCOVI |
RDATA |
CONTR: Y DATA NOBS MIX: DATA |
RECOMPUTE |
$NONPARAMETRIC |
RECORDS=ID |
$DATA RECORDS=ID Example RECORDS=ID Example 2 |
RECORDS, RECS, NRECORDS, NRECS |
$DATA FINISH RECORDS=ID Example RECORDS=ID Example 2 |
REPEAT |
$ESTIMATION record options |
REPEAT1 |
$ESTIMATION record options |
REPEAT2 |
$ESTIMATION record options |
REPEAT, REPEAT1, REPEAT2 |
$ESTIMATION, $ESTM |
REPL |
$DATA |
REPL_ |
$INPUT REPL_ data item (NM75) |
REPLACE |
Bayes Example 7r $SIMULATION |
REPLACE, REPLACEMENT |
$ABBREVIATED Abbreviated Function Examples Infn_interpolation example 2 |
REPS |
DOEXPAND |
REQUESTFIRST |
$SIMULATION |
REQUESTSECOND |
$SIMULATION |
RES |
Data_average example Displayed PRED-Defined Items Expectation example PRED_RES_WRES $SCATTERPLOT $TABLE |
RESCALE |
$MSFI |
RESET |
$WARNINGS |
RESI |
$SCATTERPLOT $TABLE |
RESUME |
$COVARIANCE, $COVR |
RETURN |
Data_Average block Expectation block Initialization-Finalization block PRED_IGNORE_DATA BLOCK (NM75) Simulation block |
REWIND |
$DATA RECORDS=ID Example RECORDS=ID Example 2 $SIMULATION Write print |
RFORMAT |
FORMAT $TABLE |
R-MATRIX |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 8 Bayes Example 9 |
RMT |
$ESTIMATION, $ESTM NONMEM output files |
RN |
Dose event record $PK PK Rate parameter |
ROCM0 |
MIX MIX CONTR: THETA |
ROCM1 |
$CONTR CONTR CONTR: Y DATA NOBS MIX MIX: DATA SPTWO |
ROCM10 |
Initialization-Finalization block Simulation: NREP, IREP |
ROCM11 |
Mixture model: MIXNUM, MIXEST |
ROCM12 |
Partial Derivative Indicators |
ROCM13 |
CONTR: KCALL |
ROCM14 |
Initialization-Finalization block Problem Iteration Counters |
ROCM15 |
Non-active ETA list for PRED |
ROCM16 |
Significant Digits from Est. Step |
ROCM17 |
Initialization-Finalization block PASS New L2 record: NEWL2 |
ROCM18 |
Nonparametric Density: DEN_, CDEN_ Nonparametric example |
ROCM1C |
CONTR: Y DATA NOBS |
ROCM2 |
CONTR: III, DIM |
ROCM22 |
Parameters OMEGA SIGMA: Current |
ROCM25 |
Mixture model: MIXP |
ROCM28 |
Super Problem Print Control |
ROCM29 |
Population single-Subject Indicator |
ROCM3 |
CONTR: F, G, H |
ROCM31 |
Data_Average block MIX CONTR: TEMPLT |
ROCM32 |
Initialization-Finalization block Record Counters: NIREC, NDREC |
ROCM34 |
Initialization-Finalization block PASS PASS NEWIND: NWIND |
ROCM35 |
Parameter Dimensions Parameters OMEGA SIGMA: Current |
ROCM4 |
CCONTR: Y, DATA, N1, N2, DIM $CONTR CONTR SPTWO |
ROCM44 |
YLO example YLO YUP YLO YUP Probability: PR_Y |
ROCM45 |
CTLO CTLO CTUP Probability: PR_CT CTUP |
ROCM46 |
Initialization-Finalization block NINDR INDR1 INDR2 |
ROCM47 |
Mixture model: MIXPT |
ROCM48 |
Initialization-Finalization block Size of Individual Record |
ROCM49 |
Initialization-Finalization block PRED, RES, WRES |
ROCM5 |
CCONTR: F, G, H |
ROCM50 |
Objective Function Value Individual Objective Function Value Individual exampl |
ROCM6 |
Finalization example ($PRED and $INFN) Initialization-Finalization block Parameters OMEGA SIGMA: Current Parameter Values: Initial and Final |
ROCM7 |
Finalization example ($PRED and $INFN) Initialization-Finalization block Standard Errors |
ROCM8 |
Finalization example ($PRED and $INFN) Initialization-Finalization block Objective Function Value |
ROCM9 |
Estim Covar Error Codes Finalization example ($PRED and $INFN) Initialization-Finalization block |
RPT_ |
$INPUT Repetition_1 example Repetition Variables RPT_ data item |
RPTI |
Repetition_2 example |
RPTI, RPTO, RPTON, PRDFL |
Repetition Variables |
RPTO |
Abbreviated code Repetition_2 example |
RPTON |
Abbreviated code Repetition_1 example |
RPTO, RPTI |
Repetition_1 example |
RS_ALLOC1 |
SIZES FSIZES prsizes |
RS_ALLOC2 |
SIZES FSIZES prsizes |
RUNDIR, RUNPDIR, NMEXEC |
nmfe utility program |
RV_ALLOC1 |
SIZES FSIZES prsizes |
RV_ALLOC2 |
SIZES FSIZES prsizes |
S |
$COVARIANCE, $COVR |
S0 |
Scaling parameter |
S0, S1-S10, SC |
$PK |
S1NUM, S2NUM, S1NIT, S2NIT, S1IT, S2IT |
Problem Iteration Counters |
SADDLE_HESS |
$ESTIMATION, $ESTM $ESTIMATION record options |
SADDLE_RESET |
$ESTIMATION, $ESTM $ESTIMATION record options |
SAEM |
Aneal Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 7r Bayes Example 9 $ESTIMATION, $ESTM $ESTIMATION record options |
SAME |
Interoccasion_variability example Mixture_model example $OMEGA $SIGMA |
SAME(m) |
$OMEGA $SIGMA |
SCALE(d) |
$OMEGA $SIGMA |
SCATTERPLOTS |
COMACT, COMSAV COM COMACT COMSAV COMRES Displayed PRED-Defined Items Phenobarb example PRED-Defined Variables $SCATTERPLOT |
$SCATTERPLOTS |
Control3 example $SCATTERPLOT |
SCO |
SIZES FSIZES prsizes |
SCOPE |
Problem Iteration Counters $SUPER Superproblem_1 example Superproblem_2 example |
SD |
$OMEGA $SIGMA SIZES FSIZES prsizes |
SDF |
SIZES FSIZES prsizes |
SEED |
Bayes Example 1 Bayes Example 1B Bayes Example 2 $CHAIN $ESTIMATION, $ESTM $ESTIMATION record options $TABLE |
SELECT |
$CHAIN $ESTIMATION, $ESTM |
SEOMEG |
Write print |
SEOMEG, SESIGM, SETHET, SETHETR |
Standard Errors |
SEOM, SESIG, SETH |
Finalization example ($PRED and $INFN) |
SESIGM |
Write print |
SETHET |
Write print |
SETHETR |
Write print |
SETHR |
Finalization example ($PRED and $INFN) |
SGSIMP |
NWPRI NWPRI examples PRIOR PRIOR Simulation: Parameters Write print |
SGSIMP, THSIMPR |
TNPRI |
SHK |
$ESTIMATION, $ESTM NONMEM output files |
SHM |
$ESTIMATION, $ESTM ETASXI NONMEM output files |
SIGDIGITS |
$ESTIMATION record options |
SIGDIGITS, NSIGDIGITS |
$ESTIMATION, $ESTM $FORMAT Phenobarb example |
SIGL |
Bayes Example 1 Bayes Example 10 Bayes Example 10l Bayes Example 1B Bayes Example 2 Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb Bayes Example 7r Bayes Example 9 $COVARIANCE, $COVR $ESTIMATION record options |
SIGLO |
$COVARIANCE, $COVR $ESTIMATION record options |
SIGL, SIGLO |
$ESTIMATION, $ESTM |
SIGMA |
FINAL PARAMETER ESTIMATE INITIAL ESTIMATE (INITIAL EST) Intra and inter-individual Parameters OMEGA SIGMA: Current $SIGMA $SIGMAP, $SIGMAPD Write print |
$SIGMA |
Control4 example $SIGMA |
SIGMAF |
Finalization example ($PRED and $INFN) Parameter Values: Initial and Final |
SIGMAP |
Bayes Example 1 NWPRI $SIGMAP, $SIGMAPD |
$SIGMAP |
Bayes Example 1 NWPRI $SIGMAP, $SIGMAPD |
SIGMAPD |
Bayes Example 1 NWPRI $SIGMAP, $SIGMAPD |
$SIGMAPD |
Bayes Example 1 NWPRI $SIGMAP, $SIGMAPD |
SIGNAL |
SIGNAL |
SIMEPS |
Correlation Across L2 Records ERROR PRED SIMEPS $SIMULATION Simulation: ETA, EPS Simulation: IETAOL IEPSOL Simulation: SIMEPS Error Code Simulation block |
SIMETA |
ERROR PK PRED SIMETA $SIMULATION Simulation: ETA, EPS Simulation: IETAOL IEPSOL Simulation block |
SIMPARON |
nmfe utility program |
SIMULATION |
Simulation: IETAOL IEPSOL |
SIMULATION, SIMULATE |
Compartment Initialization Block CONTR: KCALL Logistic regression example Nonparametric example Plasma urine example RANDMT, RANDMTU RANDOM SIMEPS SIMETA $SIMULATION Simulation_1 example Simulation_2 example Simulation_3 example Simulation: ETA, EPS Simulation: NREP, IREP Superproblem_1 example Superproblem_2 example Verbatim code |
$SIMULATION, $SIMULATE |
Nonparametric example Plasma urine example |
SIMULATION, SIMULATE |
Plasma urine example |
$SIMULATION, $SIMULATE |
$SIMULATION Simulation_1 example |
SIMULATION, SIMULATE |
Simulation_1 example |
$SIMULATION, $SIMULATE |
Simulation_2 example |
SIMULATION, SIMULATE |
Simulation_2 example |
$SIMULATION, $SIMULATE |
Simulation_3 example |
SIMULATION, SIMULATE |
Simulation_3 example |
SIN |
Abbreviated code |
SIRCENTER |
$COVARIANCE, $COVR |
SIRCLOCKSEED |
$COVARIANCE, $COVR |
SIRDF |
$COVARIANCE, $COVR |
SIRMAXWT |
$COVARIANCE, $COVR |
SIRMINWT |
$COVARIANCE, $COVR |
SIRNITER |
$COVARIANCE, $COVR |
SIRPARAFPRINT |
$COVARIANCE, $COVR |
SIRPRINT |
$COVARIANCE, $COVR |
SIRSAMPLE |
$COVARIANCE, $COVR |
SIRSEED |
$COVARIANCE, $COVR |
SIRTHBND |
$COVARIANCE, $COVR |
SIZES |
$PROBLEM $SIZES $WARNINGS |
$SIZES |
$SIZES |
SKIP |
Abbreviated code $BIND $DATA DATE data item $INPUT SKIP |
SLKJDF |
$ESTIMATION, $ESTM $ESTIMATION record options $SLKJDF |
$SLKJDF |
$SLKJDF |
SLOW |
$COVARIANCE, $COVR $ESTIMATION, $ESTM $ESTIMATION record options |
SMT |
$ESTIMATION, $ESTM NONMEM output files |
SN |
$PK PK Scaling parameter |
SORT |
$ESTIMATION record options |
SORT, NOSORT |
$ESTIMATION, $ESTM |
SOURCE_EPS |
$SIMULATION |
SPECIAL |
$COVARIANCE, $COVR |
SPTWO |
PRED_RES_WRES SPTWO Stubs $SUBROUTINES |
SQRT |
Abbreviated code |
SS |
Absorption lag parameter Dose event record Exogenous supplementation example $INPUT Interoccasion_variability example SS data item SS dose event record |
SS6 |
Diff Eq Solver Settings |
SS6, SS9 |
SS6 SS9 |
SS9 |
Diff Eq Solver Settings |
SSATOL |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 $SUBROUTINES $TOL TOL |
SSATOLC |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 |
SS, SS1-SS7, SS9 |
$SUBROUTINES |
SS, SS1-SS7, SS9, SS11-12 |
SS option |
SSS, SSS0 |
SS option |
SSTOL |
$SUBROUTINES $TOL TOL |
STANDARD |
$OMEGA $SIGMA |
STDOBJ |
$ESTIMATION, $ESTM $ESTIMATION record options |
STEP |
DOEXPAND |
STIELTJES |
$ESTIMATION, $ESTM $ESTIMATION record options Stieltjes example |
STIELTJ_SIZE |
SIZES FSIZES prsizes |
STOP_TIME, |
STOP_TIME, ITASK_ (NM75) |
STRAT, STRATF |
$NONPARAMETRIC $SIMULATION |
SUBPROBLEMS |
$SIMULATION Simulation_2 example Simulation_3 example |
SUBROUTINE |
Simulation: IETAOL IEPSOL $SUBROUTINES |
$SUBROUTINES |
Control3 example $SUBROUTINES |
SUBS, SUBROUTINES |
SUBROUTINE $SUBROUTINES |
SUPER |
$PROBLEM $SIZES $WARNINGS |
$SUPER |
Problem Iteration Counters $SUPER Superproblem_1 example Superproblem_2 example |
SUPP |
SUPP Initialization-Finalization block |
SUPRESET |
$SIMULATION |
SVARF |
$ESTIMATION, $ESTM $ESTIMATION record options $svarf |
$SVARF |
$svarf |
T |
$AES AES $AESINITIAL $DES DES |
TABLE |
COMACT, COMSAV COM COMACT COMSAV COMRES Displayed PRED-Defined Items Phenobarb example PRED-Defined Variables Simulation_1 example Simulation_2 example $TABLE |
$TABLE |
Control3 example Phenobarb example |
TABLE |
Phenobarb example |
$TABLE |
Simulation_1 example |
TABLE |
Simulation_1 example |
$TABLE |
Simulation_2 example |
TABLE |
Simulation_2 example |
$TABLE |
$TABLE |
TAN |
Abbreviated code |
TBLN |
$CHAIN $ESTIMATION, $ESTM $ESTIMATION record options $ETAS, $PHIS $RCOV, $RCOVI |
TDELTA |
FINEDATA NMTEMPLATE |
T-DISTRIBUTION |
$SIMULATION |
TEMPLT |
Data_Average block MIX CONTR: TEMPLT Mixture model: MIXPT $OMIT |
THBND |
$COVARIANCE, $COVR |
THETA |
$AES AES $DES DES DES AES: ICALL, IDEFD, IDEFA DES AES: THETA FINAL PARAMETER ESTIMATE INITIAL ESTIMATE (INITIAL EST) MIX CONTR: THETA $THETA $THETAI $THETAP, $THETAPV $THETAR |
$THETA |
Control3 example Control4 example INITIAL ESTIMATE (INITIAL EST) $THETA |
THETAC |
MIX CONTR: THETA |
THETAF |
Finalization example ($PRED and $INFN) Parameter Values: Initial and Final |
THETAFR |
Finalization example ($PRED and $INFN) Parameter Values: Initial and Final |
THETAI |
Stubs $THETAI |
$THETAI |
$THETAI |
THETA(n) |
$ERROR ERROR INFN $PK PK $PRED PRED |
THETAP |
Bayes Example 1 Bayes Example 1B Bayes Example 8 NWPRI $THETAI $THETAP, $THETAPV $THETAR |
$THETAP |
Bayes Example 1 Bayes Example 1B Bayes Example 8 NWPRI $THETAP, $THETAPV |
THETAPI |
$THETAI $THETAR |
THETAPV |
Bayes Example 1 Bayes Example 1B Bayes Example 8 NWPRI $THETAP, $THETAPV |
$THETAPV |
Bayes Example 1 Bayes Example 1B Bayes Example 8 NWPRI $THETAP, $THETAPV |
THETAR |
Stubs $THETAR |
$THETAR |
$THETAR |
THIN |
$ESTIMATION, $ESTM $ESTIMATION record options |
THSIMP |
NWPRI NWPRI examples PRIOR PRIOR Simulation: Parameters TNPRI Write print |
THSIMPR |
NWPRI NWPRI examples PRIOR PRIOR Simulation: Parameters Write print |
TIME |
Calling protocol phrase Control5 example DATE data item $INPUT TIME data item |
TNPRI |
PRIOR PRIOR Simulation: Parameters $PRIOR TNPRI TNPRI examples |
TO |
$MODEL $SCATTERPLOT $TABLE |
TOL |
ADVAN10 ADVAN6 ADVAN8 ADVAN13 ADVAN14 ADVAN9_15 ADVAN (general) Control7 example $COVARIANCE, $COVR $SUBROUTINES $TOL TOL |
$TOL |
$TOL |
TOL |
$TOL TOL |
TOLC |
ADVAN6 ADVAN8 ADVAN13 ADVAN14 |
TOS |
$COVARIANCE, $COVR |
TPRDEFAULT |
nmfe utility program |
TPU |
$ESTIMATION record options |
TRANS |
TRANS (subroutine) |
TRANS1 |
Bayes Example 3 Bayes Example 4 Bayes Example 5 Bayes Example 6 Bayes Example 6s Bayes Example 6sb TRANS1 |
TRANS2 |
ADVAN1 ADVAN2 Bayes Example 10 Bayes Example 10l Bayes Example 7r Interoccasion_variability example Phenobarb example TRANS2 |
TRANS3 |
ADVAN3 ADVAN4 TRANS3 |
TRANS4 |
ADVAN11 ADVAN12 ADVAN3 ADVAN4 Bayes Example 1 Bayes Example 1B Bayes Example 2 Bayes Example 8 Bayes Example 9 FOCE_PARALLEL example Multiple_dose example TRANS4 |
TRANS5 |
ADVAN3 ADVAN4 Exogenous supplementation example TRANS5 |
TRANS6 |
ADVAN11 ADVAN12 ADVAN3 ADVAN4 TRANS6 |
TRANSLATE |
$DATA |
TRANS, TRANS1-TRANS6 |
$SUBROUTINES TRANS (option) |
TRSKIP, PRSAME, PRDEFAULT, PRCOMPILE |
nmfe utility program |
TRUE |
Nonparametric example $SIMULATION |
TSCALE, XSCALE |
$PK PK Time scale parameter |
TSTART |
FINEDATA NMTEMPLATE |
TSTATE |
$PK State Vector: A State Vector Time: TSTATE |
TSTOP |
FINEDATA NMTEMPLATE |
TTDF |
$ESTIMATION, $ESTM $ESTIMATION record options $SIMULATION $TTDF (NM75) |
$TTDF |
$TTDF (NM75) |
UNCONDITIONAL |
$NONPARAMETRIC $SCATTERPLOT $TABLE |
UNIFORM |
RANDMT, RANDMTU RANDOM $SIMULATION |
UNINT, UNINTERESTING |
$OMEGA $SIGMA $THETA |
UNIT |
Control3 example $SCATTERPLOT |
USMETA |
$SUBROUTINES |
U-TURN |
$ESTIMATION, $ESTM |
UTURN |
$ESTIMATION, $ESTM |
V |
$PK TRANS2 TRANS3 |
V1, V2, V3, V4 |
$PK TRANS4 |
VALUES |
$OMEGAP, $OMEGAPD |
VALUE, VALUES |
$OMEGA $SIGMA |
VARCALC |
$TABLE |
VARIANCE |
$OMEGA $SIGMA |
VECTOR |
$ABBREVIATED |
VECTR |
$TABLE |
VECTR, VECTRA-VECTRZ |
Abbreviated code Abbreviated Function Abbreviated Function Examples Transit Compartment Examples |
VERSION |
$MSFI |
VM |
ADVAN10 |
VPD |
$ESTIMATION, $ESTM NONMEM output files |
VPT |
$ESTIMATION, $ESTM NONMEM output files |
VRBL |
PRED-Defined Variables |
VS |
$SCATTERPLOT |
VSS |
$PK TRANS3 |
WARNINGMAXIMUM, WMAX |
$WARNINGS |
WARNINGS |
$WARNINGS |
WHILE |
Abbreviated code SIMETA Transit Compartment Examples |
WIDE |
$DATA |
WRES |
Displayed PRED-Defined Items PRED_RES_WRES $SCATTERPLOT $TABLE |
WRESCHOL |
$TABLE |
WRESI |
$SCATTERPLOT $TABLE |
WRITE |
Abbreviated code Write print |
XMLOFF, XMLOFF, FLUSHTIME |
nmfe utility program |
XN |
$OMEGA $SIGMA $THETA |
XSCALE, TSCALE |
$PK PK Time scale parameter |
XVID1-XVID5 |
EVID data item $INPUT |
Y |
CCONTR: Y, DATA, N1, N2, DIM CONTR: Y DATA NOBS $ERROR $PRED |
YLO |
YLO example |
ZERO |
$ESTIMATION, $ESTM $ESTIMATION record options |